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<li class="navelem"><a class="el" href="namespace_s_p_h.html">SPH</a></li><li class="navelem"><a class="el" href="class_s_p_h_1_1_mono_field_electro_physiology.html">MonoFieldElectroPhysiology</a></li>  </ul>
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<a href="#pub-methods">Public Member Functions</a> &#124;
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<div class="title">SPH::MonoFieldElectroPhysiology Class Reference</div>  </div>
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<p>material class for electro_physiology.  
 <a href="class_s_p_h_1_1_mono_field_electro_physiology.html#details">More...</a></p>

<p><code>#include &lt;<a class="el" href="electro__physiology_8h_source.html">electro_physiology.h</a>&gt;</code></p>

<p>Inherits <a class="el" href="class_s_p_h_1_1_diffusion_reaction.html">SPH::DiffusionReaction&lt; Solid &gt;</a>.</p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:aec0e0a09a8503ea4487936ddefb4de3e"><td class="memItemLeft" align="right" valign="top"><a id="aec0e0a09a8503ea4487936ddefb4de3e"></a>
&#160;</td><td class="memItemRight" valign="bottom"><b>MonoFieldElectroPhysiology</b> (<a class="el" href="class_s_p_h_1_1_electro_physiology_reaction.html">ElectroPhysiologyReaction</a> &amp;electro_physiology_reaction, Real diff_cf, Real bias_diff_cf, Vecd bias_direction)</td></tr>
<tr class="separator:aec0e0a09a8503ea4487936ddefb4de3e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="inherit_header pub_methods_class_s_p_h_1_1_diffusion_reaction"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_class_s_p_h_1_1_diffusion_reaction')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="class_s_p_h_1_1_diffusion_reaction.html">SPH::DiffusionReaction&lt; Solid &gt;</a></td></tr>
<tr class="memitem:a1ffa4b3efb62dc2b8c7a4a453c7a49c1 inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_diffusion_reaction.html#a1ffa4b3efb62dc2b8c7a4a453c7a49c1">DiffusionReaction</a> (StdVec&lt; std::string &gt; species_name_list, ConstructorArgs &amp;&amp;...args)</td></tr>
<tr class="separator:a1ffa4b3efb62dc2b8c7a4a453c7a49c1 inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a0b8e08b31fcb4799d350314496a106ca inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_diffusion_reaction.html#a0b8e08b31fcb4799d350314496a106ca">DiffusionReaction</a> (<a class="el" href="class_s_p_h_1_1_base_reaction_model.html">BaseReactionModel</a> &amp;species_reaction, StdVec&lt; std::string &gt; species_name_list, ConstructorArgs &amp;&amp;...args)</td></tr>
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<a class="el" href="classsize__t.html">size_t</a>&#160;</td><td class="memItemRight" valign="bottom"><b>NumberOfSpecies</b> ()</td></tr>
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<tr class="memitem:adb3042f99b202e503ab3f91759366cd5 inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top"><a id="adb3042f99b202e503ab3f91759366cd5"></a>
<a class="el" href="classsize__t.html">size_t</a>&#160;</td><td class="memItemRight" valign="bottom"><b>NumberOfSpeciesDiffusion</b> ()</td></tr>
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<tr class="memitem:a18c8ea178ba308f82e4a90860c39fbfb inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top"><a id="a18c8ea178ba308f82e4a90860c39fbfb"></a>
StdVec&lt; <a class="el" href="class_s_p_h_1_1_base_diffusion.html">BaseDiffusion</a> *&gt;&#160;</td><td class="memItemRight" valign="bottom"><b>SpeciesDiffusion</b> ()</td></tr>
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<tr class="memitem:abe1c74aac60e794953c5c69de11867ae inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top"><a id="abe1c74aac60e794953c5c69de11867ae"></a>
<a class="el" href="class_s_p_h_1_1_base_reaction_model.html">BaseReactionModel</a> *&#160;</td><td class="memItemRight" valign="bottom"><b>SpeciesReaction</b> ()</td></tr>
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std::map&lt; std::string, <a class="el" href="classsize__t.html">size_t</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><b>SpeciesIndexMap</b> ()</td></tr>
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StdVec&lt; std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><b>getSpeciesNameList</b> ()</td></tr>
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void&#160;</td><td class="memItemRight" valign="bottom"><b>assignBaseParticles</b> (<a class="el" href="class_s_p_h_1_1_base_particles.html">BaseParticles</a> *base_particles) override</td></tr>
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<tr class="memitem:a4d00a03cfc509812c4e0c27919318bd7 inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top"><a id="a4d00a03cfc509812c4e0c27919318bd7"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_diffusion_reaction.html#a4d00a03cfc509812c4e0c27919318bd7">getDiffusionTimeStepSize</a> (Real smoothing_length)</td></tr>
<tr class="memdesc:a4d00a03cfc509812c4e0c27919318bd7 inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get diffusion time step size. Here, I follow the reference: <a href="https://www.uni-muenster.de/imperia/md/content/physik_tp/lectures/ws2016-2017/num_methods_i/heat.pdf">https://www.uni-muenster.de/imperia/md/content/physik_tp/lectures/ws2016-2017/num_methods_i/heat.pdf</a>. <br /></td></tr>
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<tr class="memitem:ae0df9513e12beb9add4f6176b46d1b54 inherit pub_methods_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_diffusion_reaction.html#ae0df9513e12beb9add4f6176b46d1b54">initializeAnDiffusion</a> (const std::string &amp;diffusion_species_name, const std::string &amp;gradient_species_name, ConstructorArgs &amp;&amp;...args)</td></tr>
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virtual <a class="el" href="class_s_p_h_1_1_diffusion_reaction.html">DiffusionReaction</a>&lt; <a class="el" href="class_s_p_h_1_1_solid.html">Solid</a> &gt; *&#160;</td><td class="memItemRight" valign="bottom"><b>ThisObjectPtr</b> () override</td></tr>
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<tr class="inherit_header pub_methods_class_s_p_h_1_1_solid"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_class_s_p_h_1_1_solid')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="class_s_p_h_1_1_solid.html">SPH::Solid</a></td></tr>
<tr class="memitem:ab945e5fa722f7f85679de44d95e9b351 inherit pub_methods_class_s_p_h_1_1_solid"><td class="memItemLeft" align="right" valign="top"><a id="ab945e5fa722f7f85679de44d95e9b351"></a>
&#160;</td><td class="memItemRight" valign="bottom"><b>Solid</b> (Real rho0, Real contact_stiffness, Real contact_friction=0.0)</td></tr>
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&#160;</td><td class="memItemRight" valign="bottom"><b>Solid</b> (Real rho0)</td></tr>
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Real&#160;</td><td class="memItemRight" valign="bottom"><b>ContactFriction</b> ()</td></tr>
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Real&#160;</td><td class="memItemRight" valign="bottom"><b>ContactStiffness</b> ()</td></tr>
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<tr class="inherit_header pub_methods_class_s_p_h_1_1_base_material"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_class_s_p_h_1_1_base_material')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="class_s_p_h_1_1_base_material.html">SPH::BaseMaterial</a></td></tr>
<tr class="memitem:a75b5d688573ea7e8ca447b6af7908851 inherit pub_methods_class_s_p_h_1_1_base_material"><td class="memItemLeft" align="right" valign="top"><a id="a75b5d688573ea7e8ca447b6af7908851"></a>
&#160;</td><td class="memItemRight" valign="bottom"><b>BaseMaterial</b> (Real rho0)</td></tr>
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std::string&#160;</td><td class="memItemRight" valign="bottom"><b>MaterialType</b> ()</td></tr>
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std::string&#160;</td><td class="memItemRight" valign="bottom"><b>LocalParametersName</b> ()</td></tr>
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Real&#160;</td><td class="memItemRight" valign="bottom"><b>ReferenceDensity</b> ()</td></tr>
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virtual void&#160;</td><td class="memItemRight" valign="bottom"><b>writeToXmlForReloadLocalParameters</b> (const std::string &amp;filefullpath)</td></tr>
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virtual void&#160;</td><td class="memItemRight" valign="bottom"><b>readFromXmlForLocalParameters</b> (const std::string &amp;filefullpath)</td></tr>
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</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
Additional Inherited Members</h2></td></tr>
<tr class="inherit_header pro_methods_class_s_p_h_1_1_solid"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_class_s_p_h_1_1_solid')"><img src="closed.png" alt="-"/>&#160;Protected Member Functions inherited from <a class="el" href="class_s_p_h_1_1_solid.html">SPH::Solid</a></td></tr>
<tr class="memitem:aa9b32eb360c7b58518e2cfc04a244343 inherit pro_methods_class_s_p_h_1_1_solid"><td class="memItemLeft" align="right" valign="top"><a id="aa9b32eb360c7b58518e2cfc04a244343"></a>
void&#160;</td><td class="memItemRight" valign="bottom"><b>setContactStiffness</b> (Real c0)</td></tr>
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<tr class="inherit_header pro_attribs_class_s_p_h_1_1_diffusion_reaction"><td colspan="2" onclick="javascript:toggleInherit('pro_attribs_class_s_p_h_1_1_diffusion_reaction')"><img src="closed.png" alt="-"/>&#160;Protected Attributes inherited from <a class="el" href="class_s_p_h_1_1_diffusion_reaction.html">SPH::DiffusionReaction&lt; Solid &gt;</a></td></tr>
<tr class="memitem:ab27005a91c379e65460f62d5343e9bf3 inherit pro_attribs_class_s_p_h_1_1_diffusion_reaction"><td class="memItemLeft" align="right" valign="top"><a id="ab27005a91c379e65460f62d5343e9bf3"></a>
StdVec&lt; std::string &gt;&#160;</td><td class="memItemRight" valign="bottom"><b>species_name_list_</b></td></tr>
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<a class="el" href="classsize__t.html">size_t</a>&#160;</td><td class="memItemRight" valign="bottom"><b>number_of_species_</b></td></tr>
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std::map&lt; std::string, <a class="el" href="classsize__t.html">size_t</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><b>species_indexes_map_</b></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>material class for electro_physiology. </p>
</div><hr/>The documentation for this class was generated from the following files:<ul>
<li>SPHINXsys/src/shared/particle_dynamics/electro_physiology/<a class="el" href="electro__physiology_8h_source.html">electro_physiology.h</a></li>
<li>SPHINXsys/src/shared/particle_dynamics/electro_physiology/<a class="el" href="electro__physiology_8cpp.html">electro_physiology.cpp</a></li>
</ul>
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